A numerical technique for studying topological effects on the thermal properties of knotted polymer rings
Abstract
The topological effects on the thermal properties of several knot configurations are investigated using Monte Carlo simulations. In order to check whether the topology of the knots is preserved during the thermal fluctuations we propose a method that allows very fast calculations and can be easily applied to arbitrarily complex knots. As an application, the specific energy and heat capacity of the trefoil, the figure-eight and the 81 knots are calculated at different temperatures and for different lengths. Short-range repulsive interactions between the monomers are assumed. The knot configurations are generated on a three-dimensional cubic lattice and sampled by means of the Wang-Landau algorithm and of the pivot method. The results obtained show that the topological effects play a key role for short-length polymers. Three temperature regimes of the growth rate of the internal energy of the system are distinguished.
- Publication:
-
Journal of Statistical Mechanics: Theory and Experiment
- Pub Date:
- November 2012
- DOI:
- 10.1088/1742-5468/2012/11/P11022
- arXiv:
- arXiv:1209.1717
- Bibcode:
- 2012JSMTE..11..022Z
- Keywords:
-
- Condensed Matter - Soft Condensed Matter
- E-Print:
- 7 pages, 12 figures, LaTeX + RevTeX. With respect to the first version, in the second version the text has been improved and all figures are now in black and white