Energy landscapes, supergraphs, and ``folding funnels'' in spin systems
Abstract
Dynamical connectivity graphs, which describe dynamical transition rates between local energy minima of a system, can be displayed against the background of a disconnectivity graph which represents the energy landscape of the system. The resulting supergraph describes both dynamics and statics of the system in a unified coarse-grained sense. We give examples of the supergraphs for several two-dimensional spin and protein-related systems. We demonstrate that disordered ferromagnets have supergraphs akin to those of model proteins whereas spin glasses behave like random sequences of amino acids that fold badly.
- Publication:
-
Physical Review E
- Pub Date:
- September 1999
- DOI:
- 10.1103/PhysRevE.60.3219
- arXiv:
- arXiv:cond-mat/9904060
- Bibcode:
- 1999PhRvE..60.3219G
- Keywords:
-
- 87.15.By;
- 75.10.Nr;
- Structure and bonding;
- Spin-glass and other random models;
- Condensed Matter - Statistical Mechanics;
- Quantitative Biology - Biomolecules
- E-Print:
- REVTeX, 9 pages, two-column, 13 EPS figures included