Accurate virus identification with interpretable Raman signatures by machine learning
Abstract
A large Raman dataset collected on a variety of viruses enables the training of machine learning (ML) models capable of highly accurate and sensitive virus identification. The trained ML models can then be integrated with a portable device to provide real-time virus detection and identification capability. We validate this conceptual framework by presenting highly accurate virus type and subtype identification results using a convolutional neural network to classify Raman spectra of viruses. The accurate and interpretable ML model developed for Raman virus identification presents promising potential in a real-time, label-free virus detection system that could be used in future outbreaks and pandemics.
- Publication:
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Proceedings of the National Academy of Science
- Pub Date:
- June 2022
- DOI:
- arXiv:
- arXiv:2206.02788
- Bibcode:
- 2022PNAS..11918836Y
- Keywords:
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- Quantitative Biology - Quantitative Methods;
- Computer Science - Machine Learning
- E-Print:
- 23 pages, 8 figures