A mini-review of the diffusion dynamics of DNA-binding proteins: experiments and models
Abstract
In the course of various biological processes, specific DNA-binding proteins must efficiently find a particular target sequence/protein or a damaged site on the DNA. DNA-binding proteins perform this task based on diffusion. Nevertheless, investigations over recent decades have found that the diffusion dynamics of DNA-binding proteins are generally complicated and, further, protein specific. In this review, we collect experimental and theoretical studies that quantify the diffusion dynamics of DNA-binding proteins and review them from the viewpoint of diffusion processes.
- Publication:
-
Journal of Korean Physical Society
- Pub Date:
- March 2021
- DOI:
- 10.1007/s40042-021-00060-y
- arXiv:
- arXiv:2011.00219
- Bibcode:
- 2021JKPS...78..408P
- Keywords:
-
- DNA-binding protein;
- Anomalous diffusion;
- Sliding;
- Hopping;
- Facilitated diffusion;
- Physics - Biological Physics
- E-Print:
- doi:10.1007/s40042-021-00060-y